Installing the r4ss R package | Basic installation | Loading the package and reading help pages | Alternative versions | Reading model output and making default plots | Creating select plots | Scripting Stock Synthesis workflows with r4ss | Read in Stock Synthesis files | Investigate the model | Modify the model | Write out the modified models | Download the Stock Synthesis executable from GitHub | Run the modified model | Investigate the model run | Should I script my whole Stock Synthesis workflow? | Functions for common stock assessment tasks | Running retrospectives | Jittering | Tuning composition data

Overview | Creating plots | Example: Creating plots from simple and adding a custom tab | read model output | make the default plots and associated HTML files | Make custom plots and write CSV file with info about them | Add custom plots to the .csv | Getting the plots onto github